I put this page up so that I won't forget about it again. In fact, I may write a few ImageJ plugins for MRI data. (we'll see)
A great online web manual that documents some of the great features of ImageJ can be found here:
Tutorials and papers relating to ImageJ
Preprocessing video sequences for Tracker3D Movement Analysis Software
ITCN: Image-based Tool for Counting Nuclei - cool research (A Variational Approach to Exploit Prior Information in Object-Background Segregation: Application to Retinal Layers Segmentation)
TrakEM2 - shape data mining and 3d reconstruction.
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